To improve the accuracy and automation of malware recognition, an Android malware analysis and detection method based on deep learning was proposed. Firstly, the malware texture fingerprint was proposed to reflect the content similarity of malicious code binary files, and 33 types of malware activity vector space were selected to reflect the potential dynamic activities of malicious code. In addition, to improve the accuracy of the classification, the AutoEncoder (AE) and the Softmax classifier were trained combined with the above characteristics. Test results on different data samples showed that the average classification accuracy of the proposed method was up to 94.9% by using Stacked AE (SAE), which is 1.1 percentage points higher than that of Support Vector Machine (SVM). The proposed method can effectively improve the accuracy of malicious code recognition.